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The rise and rise of exome sequencing

Ku, Chee-Seng, Cooper, David Neil and Patrinos, George P. 2017. The rise and rise of exome sequencing. Public Health Genomics 19 (6) , pp. 315-324. 10.1159/000450991

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Abstract

Beginning in 2009, the advent of exome sequencing has contributed significantly towards new discoveries of heritable germline mutations and de novo mutations for rare Mendelian disorders with hitherto unknown genetic aetiologies. Exome sequencing is an efficient tool to identify disease mutations without the need of a multi-generational pedigree. Sequencing a single proband or multiple affected individuals has been shown to be successful in identifying disease mutations, but parents would be required in the case of de novo mutations. In addition to heritable germline and de novo mutations, exome sequencing has also succeeded in unravelling somatic driver mutations for a wide range of cancers through individual studies or international collaborative effort such as the Cancer Genome International Consortium. By contrast, the application of exome sequencing in complex diseases is relatively limited; probably it would be too expensive were it applied to thousands of samples to achieve the statistical power for rare or low frequency variants (<1%). On top of research discoveries, the application of exome sequencing as a diagnostic tool is also increasingly evident. In this article, we summarize and discuss the progress that has been made in these areas during almost a decade.

Item Type: Article
Date Type: Publication
Status: Published
Schools: Medicine
Subjects: R Medicine > R Medicine (General)
Uncontrolled Keywords: Cancer · Complex disease · Diagnostic · Exome · Mendelian disorder · Next-generation sequencing
Publisher: Karger
ISSN: 1662-4246
Date of First Compliant Deposit: 12 January 2017
Date of Acceptance: 23 September 2016
Last Modified: 05 Jun 2017 09:49
URI: http://orca.cf.ac.uk/id/eprint/97369

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