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Online Research @ Cardiff
Browse by Current Cardiff authors
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Number of items: 49.
Pan, Tao, Wang, Hui, Orozco ter wengel, Pablo, Hu, Chao-Chao, Wu, Gui-You, Qian, Li-Fu, Sun, Zhong-Lou, Shi, Wen-Bo, Yan, Peng, Wu, Xiao-Bing and Zhang, Bao-Wei
2019.
Long-term sky islands generate highly divergent lineages of a narrowly distributed stream salamander (Pachyhynobius shangchengensis) in mid-latitude mountains of East Asia.
BMC Evolutionary Biology
19
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10.1186/s12862-018-1333-8
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Pitt, Daniel, Bruford, Michael W., Barbato, Mario, Orozco Ter Wengel, Pablo, Martínez, Rodrigo and Sevane, Natalia
2019.
Demography and rapid local adaptation shape Creole cattle genome diversity in the tropics.
Evolutionary Applications
12
(1)
, pp. 105-122.
10.1111/eva.12641
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| Pitt, Daniel, Sevane Fernandez, Natalia, Nicolazzi, Ezequiel L., MacHugh, David E., Park, Stepehn D. E., Colli, Licia, Martinez, Rodrigo, Bruford, Michael W. and Orozco Ter Wengel, Pablo 2019. Domestication of cattle: two or three events? Evolutionary Applications 12 (1) , pp. 123-136. 10.1111/eva.12674 |
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Stanton, David W G, Frandsen, Peter, Waples, Ryan K, Heller, Rasmus, Russo, Isa-Rita M, Orozco Ter Wengel, Pablo, Tingskov Pedersen, Casper-Emil, Siegismund, Hans R and Bruford, Michael W
2019.
More grist for the mill?: Species delimitation in the genomic era and its implications for conservation.
Conservation Genetics
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Stranden, Ismo, Kantanen, Juha, Russo, Isa-Rita M, Orozco Ter Wengel, Pablo, Bruford, Michael W and Consortium, Climgen
2019.
Genomic selection strategies for breeding adaptation and production in dairy cattle under climate change.
Heredity
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Uren Webster, Tamsyn, Rodriguez-Barreto, Deiene, Martin, Samuel, Van Oosterhout, Cock, Orozco Ter Wengel, Pablo, Cable, Joanne, Hamilton, Alistair, Garcia de Leaniz, Carlos and Conseuegra, Sofia
2018.
Contrasting effects of acute and chronic stress on the transcriptome, epigenome, and immune response of Atlantic salmon.
Epigenetics
13
(12)
, pp. 1191-1207.
10.1080/15592294.2018.1554520
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| Marin, J, Rivera, R, Varas, V, Cortes, J, Agapito, A, Chero, A, Chavez, A, Johnson, W and Orozco Ter Wengel, Pablo 2018. Genetic variation in coat colour genes MC1R and ASIP provides insights into domestication and management of South American camelids. Frontiers in Genetics 9 , 487. 10.3389/fgene.2018.00487 |
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| Ellison, Amy, Uren-Webster, Tamsyn, Rey, Olivier, Garcia de Leaniz, Carlos, Consuegra, Sofia, Orozco Ter Wengel, Pablo and Cable, Joanne 2018. Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density. BMC Genomics 19 , 723. 10.1186/s12864-018-5098-7 |
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| Robinson, Chloe Victoria, Garcia de Leaniz, Carlos, James, Joanna, Cable, Joanne, Orozco Ter Wengel, Pablo and Consuegra, Sofia 2018. Genetic diversity and parasite facilitated establishment of the invasive signal crayfish (Pacifastacus leniusculus) in Great Britain. Ecology and Evolution 8 (18) , pp. 9181-9191. 10.1002/ece3.4235 |
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| Liu, Zhijin, Tan, Xinxin, Orozco-terWengel, Pablo, Zhou, Xuming, Zhang, Liye, Tian, Shilin, Yan, Zhongze, Xu, Huailiang, Ren, Baoping, Zhang, Peng, Xiang, Zuofu, Sun, Binghua, Roos, Christian, Bruford, Michael W. and Li, Ming 2018. Population genomics of wild Chinese rhesus macaques reveals a dynamic demographic history and local adaptation, with implications for biomedical research. GigaScience 7 (9) , giy106. 10.1093/gigascience/giy106 |
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| Casey, C. S., Orozco Ter Wengel, Pablo, Yaya, K., Kadwell, M., Fernández, M., Marín, J. C., Rosadio, R., Maturrano, L., Hoces, D., Hu, Y., Wheeler, J. C. and Bruford, Michael W. 2018. Comparing genetic diversity and demographic history in co-distributed wild South American camelids. Heredity 121 (4) , pp. 387-400. 10.1038/s41437-018-0120-z |
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Biscarini, Filippo, Cozzi, P. and Orozco Ter Wengel, Pablo
2018.
Lessons learnt on the analysis of large sequence data in animal genomics.
Animal Blood Groups and Biochemical Genetics
49
(3)
, pp. 147-158.
10.1111/age.12655
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| Alberto, Florian J., Boyer, Frédéric, Orozco Ter Wengel, Pablo, Streeter, Ian, Servin, Bertrand, de Villemereuil, Pierre, Benjelloun, Badr, Librado, Pablo, Biscarini, Filippo, Colli, Licia, Barbato, Mario, Zamani, Wahid, Alberti, Adriana, Engelen, Stefan, Stella, Alessandra, Joost, Stéphane, Ajmone-Marsan, Paolo, Negrini, Riccardo, Orlando, Ludovic, Rezaei, Hamid Reza, Naderi, Saeid, Clarke, Laura, Flicek, Paul, Wincker, Patrick, Coissac, Eric, Kijas, James, Tosser-Klopp, Gwenola, Chikhi, Abdelkader, Bruford, Michael, Taberlet, Pierre and Pompanon, François 2018. Convergent genomic signatures of domestication in sheep and goats. Nature Communications 9 (1) , 813. 10.1038/s41467-018-03206-y |
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| Nater, Alexander, Mattle-Greminger, Maja P., Nurcahyo, Anton, Nowak, Matthew G., de Manuel, Marc, Desai, Tariq, Groves, Colin, Pybus, Marc, Sonay, Tugce Bilgin, Roos, Christian, Lameira, Adriano R., Wich, Serge A., Askew, James, Davila-Ross, Marina, Fredriksson, Gabriella, de Valles, Guillem, Casals, Ferran, Prado-Martinez, Javier, Goossens, Benoit, Verschoor, Ernst J., Warren, Kristin S., Singleton, Ian, Marques, David A., Pamungkas, Joko, Perwitasari-Farajallah, Dyah, Rianti, Puji, Tuuga, Augustine, Gut, Ivo G., Gut, Marta, Orozco Ter Wengel, Pablo, van Schaik, Carel P., Bertranpetit, Jaume, Anisimova, Maria, Scally, Aylwyn, Marques-Bonet, Tomas, Meijaard, Erik and Krützen, Michael 2017. Morphometric, behavioral, and genomic evidence for a new orangutan species. Current Biology 27 (22) , pp. 3487-3498. 10.1016/j.cub.2017.09.047 |
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| Stucki, S., Orozco Ter Wengel, Pablo, Forester, B. R., Duruz, S., Colli, L., Masembe, C., Negrini, R., Landguth, E., Jones, M. R., Bruford, Michael William, Taberlet, P. and Joost, S. 2017. High performance computation of landscape genomic models including local indicators of spatial association. Molecular Ecology Resources 17 (5) , pp. 1072-1089. 10.1111/1755-0998.12629 |
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| Barbato, Mario, Hailer, Frank, Orozco Ter Wengel, Pablo, Kijas, James, Mereu, Paolo, Cabras, Pierangela, Mazza, Raffaele, Pirastru, Monica and Bruford, Michael W. 2017. Genomic signatures of adaptive introgression from European mouflon into domestic sheep. Scientific Reports 7 , 7623. 10.1038/s41598-017-07382-7 |
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| Valbuena-Ureña, E., Soler-Membrives, A., Steinfartz, S., Orozco Ter Wengel, Pablo and Carranza, S. 2017. No signs of inbreeding despite long-term isolation and habitat fragmentation in the critically endangered Montseny brook newt (Calotriton arnoldi). Heredity 118 (5) , pp. 424-435. 10.1038/hdy.2016.123 |
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| Kevin, Leempoel, Solange, Duruz, Estelle, Rochat, Ivo, Widmer, Orozco Ter Wengel, Pablo and Stephane, Joost 2017. Simple rules for an efficient use of geographic information systems in molecular ecology. Frontiers in Ecology and Evolution 5 , 33. 10.3389/fevo.2017.00033 |
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| Zhou, Xuming, Meng, Xuehong, Liu, Zhijin, Chang, Jiang, Wang, Boshi, Li, Mingzhou, Orozco Ter Wengel, Pablo, Tian, Shilin, Wen, Changlong, Wang, Ziming, Garber, Paul A, Pan, Huijuan, Ye, Xinping, Xiang, Zuofu, Bruford, Michael William, Edwards, Scott V., Cao, Yinchuan, Yu, Shuancang, Gao, Lianju, Cao, Zhisheng, Liu, Guangjian, Ren, Baoping, Shi, Fanglei, Peterfi, Zalan, Li, Dayong, Li, Baoguo, Jiang, Zhi, Li, Junsheng, Gladyshev, Vadim N., Li, Ruiqiang and Li, Ming 2016. Population genomics reveals low genetic diversity and adaptation to hypoxia in snub-nosed monkeys. Molecular Biology and Evolution 33 (10) , pp. 2670-2681. 10.1093/molbev/msw150 |
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| Hudson, M. A., Young, R. P., D'Urban Jackson, J., Orozco Ter Wengel, Pablo, Martin, L., James, A., Sulton, M., Garcia, G., Griffiths, R. A., Thomas, R., Magin, C., Bruford, M. W. and Cunningham, A. A. 2016. Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation. Scientific Reports 6 (1) , 30772. 10.1038/srep30772 |
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| Liu, Zhijin, Liu, Guangjian, Hailer, Frank, Orozco Ter Wengel, Pablo, Tan, Xinxin, Tian, Jundong, Yan, Zhongze, Zhang, Baowei and Li, Ming 2016. Dietary specialization drives multiple independent losses and gains in the bitter taste gene repertoire of Laurasiatherian Mammals. Frontiers in Zoology 13 (1) , 28. 10.1186/s12983-016-0161-1 |
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| Almathen, Faisal, Charruau, Pauline, Mohandesan, Elmira, Mwacharo, Joram M., Orozco Ter Wengel, Pablo, Pitt, Daniel, Abdussamad, Abdussamad M., Uerpmann, Margarethe, Uerpmann, Hans-Peter, De Cupere, Bea, Magee, Peter, Alnaqeeb, Majed A., Salim, Bashir, Raziq, Abdul, Dessie, Tadelle, Abdelhadi, Omer M., Banabazi, Mohammad H., Al-Eknah, Marzook, Walzer, Chris, Faye, Bernard, Hofreiter, Michael, Peters, Joris, Hanotte, Olivier and Burger, Pamela A. 2016. Ancient and modern DNA reveal dynamics of domestication and cross-continental dispersal of the dromedary. Proceedings of the National Academy of Sciences of the United States of America 113 (24) , pp. 6707-6712. 10.1073/pnas.1519508113 |
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| Sherrard-Smith, Ellie, Stanton, David W. G., Cable, Joanne, Orozco Ter Wengel, Pablo, Simpson, Vic R., Elmeros, Morten, van Dijk, Jiska, Simonnet, Franck, Roos, Anna, Lemarchand, Charles, Poledník, Lukás, Heneberg, Petr and Chadwick, Elizabeth Anna 2016. Distribution and molecular phylogeny of biliary trematodes (Opisthorchiidae) infecting native Lutra lutra and alien Neovison vison across Europe. Parasitology International 65 (2) , pp. 163-170. 10.1016/j.parint.2015.11.007 |
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| Orozco Ter Wengel, Pablo 2016. The devil is in the details: the effect of population structure on demographic inference. Heredity 116 , pp. 349-350. 10.1038/hdy.2016.9 |
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| Bruford, Michael William, Ginja, Catarina, Hoffmann, Irene, Joost, Stéphane, Orozco Ter Wengel, Pablo, Alberto, Florian J., Amaral, Andreia J., Barbato, Mario, Biscarini, Filippo, Colli, Licia, Costa, Mafalda, Curik, Ino, Duruz, Solange, Ferencakovic, Maja, Fischer, Daniel, Fitak, Robert, Groeneveld, Linn F., Hall, Stephen J. G., Hanotte, Olivier, Hassan, Faiz-ul, Helsen, Philippe, Iacolina, Laura, Kantanen, Juha, Leempoel, Kevin, Lenstra, Johannes A., Ajmone-Marsan, Paolo, Masembe, Charles, Megens, Hendrik-Jan, Miele, Mara, Neuditschko, Markus, Nicolazzi, Ezequiel L., Pompanon, François, Roosen, Jutta, Sevane, Natalia, Smetko, Anamarija, Stambuk, Anamaria, Streeter, Ian, Stucki, Sylvie, Supakorn, China, Telo Da Gama, Luis, Tixier-Boichard, Michèle, Wegmann, Daniel and Zhan, Xiangjiang 2015. Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025. Frontiers in Genetics 6 , 314. 10.3389/fgene.2015.00314 |
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| Orozco Ter Wengel, Pablo, Barbato, Mario, Nicolazzi, Ezequiel, Biscarini, Filippo, Milanesi, Marco, Davies, Wyn, Williams, Don, Stella, Alessandra, Ajmone-Marsan, Paolo and Bruford, Michael William 2015. Revisiting demographic processes in cattle with genome-wide population genetic analysis. Frontiers in Genetics 6 , 191. 10.3389/fgene.2015.00191 |
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| MacLeod, Amy, Rodríguez, Ariel, Vences, Miguel, Orozco Ter Wengel, Pablo, García, Carolina, Trillmich, Fritz, Gentile, Gabriele, Caccone, Adalgisa, Quezada, Galo and Steinfartz, Sebastian 2015. Hybridization masks speciation in the evolutionary history of the Galápagos marine iguana. Proceedings of the Royal Society B: Biological Sciences 282 (1809) , 20150425. 10.1098/rspb.2015.0425 |
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| Barbato, Mario, Orozco Ter Wengel, Pablo, Tapio, Miika and Bruford, Michael William 2015. SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data. Frontiers in Genetics 6 , 109. 10.3389/fgene.2015.00109 |
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| Orozco-terWengel, Pablo and Bruford, Michael William 2014. Mixed signals from hybrid genomes. Molecular Ecology 23 (16) , pp. 3941-3943. 10.1111/mec.12863 |
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| Marín, J. C., Orozco-terWengel, Pablo, Romero, K., Vásquez, J. P., Varas, V. and Vianna, J. A. 2014. Cross-amplification of nonspecific microsatellites markers: a useful tool to study endangered/vulnerable species of southern Andes deer. Genetics and Molecular Research 13 (2) , pp. 3193-3200. 10.4238/2014.April.25.4 |
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Gonzalez, Benito A., Orozco-terWengel, Pablo, von Borries, Rainer, Johnson, Warren E., Franklin, William L. and Marín, Juan C.
2014.
Maintenance of genetic diversity in an introduced island population of guanacos after seven decades and two severe demographic bottlenecks: Implications for camelid conservation.
PLoS ONE
9
(3)
, e91714.
10.1371/journal.pone.0091714
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| Tobler, R., Franssen, S. U., Kofler, R., Orozco-terWengel, Pablo, Nolte, V., Hermisson, J. and Schlotterer, C. 2014. Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments. Molecular Biology and Evolution 31 (2) , pp. 364-375. 10.1093/molbev/mst205 |
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| Cunha, Luis, Montiel, R., Novo, Marta, Orozco-terWengel, Pablo, Rodrigues, A., Morgan, Andrew John and Kille, Peter 2014. Living on a volcano's edge: genetic isolation of an extremophile terrestrial metazoan. Heredity 112 (2) , pp. 132-142. 10.1038/hdy.2013.84 |
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| Donnelly, Robert K., Harper, Georgina L., Morgan, A. John, Orozco-Terwengel, Pablo, Pinto-Juma, Gabriela A. and Bruford, Michael William 2013. Nuclear DNA recapitulates the cryptic mitochondrial lineages of 'Lumbricus rubellus' and suggests the existence of cryptic species in an ecotoxological soil sentinel. Biological Journal of the Linnean Society 110 (4) , pp. 780-795. 10.1111/bij.12171 |
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| Marín, Juan C., Varas, Valeria, Vila, Alejandro R., López, Rodrigo, Orozco-terWengel, Pablo, Corti, Paulo and Riddle, Brett 2013. Refugia in Patagonian fjords and the eastern Andes during the Last Glacial Maximum revealed by huemul (Hippocamelus bisulcus) phylogeographical patterns and genetic diversity. Journal of Biogeography 40 (12) , pp. 2285-2298. 10.1111/jbi.12161 |
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| Orozco-terWengel, Pablo, Andreone, Franco, Louis, Edward and Vences, Miguel 2013. Mitochondrial introgressive hybridization following a demographic expansion in the tomato frogs of Madagascar, genus Dyscophus. Molecular Ecology 22 (24) , pp. 6074-6090. 10.1111/mec.12558 |
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| Orozco-terWengel, Pablo, Chiari, Ylenia, Vieites, David R., Louis Jr., Edward and Pedrono, Miguel 2013. Isolation and characterization of six polymorphic microsatellite loci for the Malagasy spider tortoise, Pyxis arachnoides and cross-amplification in Pyxis planicauda. Amphibia-Reptilia 34 (1) , pp. 125-128. 10.1163/15685381-00002866 |
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| Vences, Miguel, Susanne Hauswaldt, J., Steinfartz, Sebastian, Rupp, Oliver, Goesmann, Alexander, Künzel, Sven, Orozco-terWengel, Pablo, Vieites, David R., Nieto-Roman, Sandra, Haas, Sabrina, Laugsch, Clara, Gehara, Marcelo, Bruchmann, Sebastian, Pabijan, Maciej, Ludewig, Ann-Kathrin, Rudert, Dirk, Angelini, Claudio, Borkin, Leo J., Crochet, Pierre-André, Crottini, Angelica, Dubois, Alain, Ficetola, Gentile Francesco, Galán, Pedro, Geniez, Philippe, Hachtel, Monika, Jovanovic, Olga, Litvinchuk, Spartak N., Lymberakis, Petros, Ohler, Annemarie and Smirnov, Nazar A. 2013. Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana. Molecular Phylogenetics and Evolution 68 (3) , pp. 657-670. 10.1016/j.ympev.2013.04.014 |
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| Orozco-terWengel, Pablo, Kapun, Martin, Nolte, VIiola, Kofler, Robert, Flatt, Thomas and Schlotterer, Christian 2012. Adaptation ofDrosophilato a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles. Molecular Ecology 21 (20) , pp. 4931-4941. 10.1111/j.1365-294X.2012.05673.x |
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| Pandey, Ram, Kofler, Robert, Orozco ter Wengel, Pablo, Nolte, Viola and Schlötterer, Christian 2011. PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila. BMC Genetics 12 (1) , 27. 10.1186/1471-2156-12-27 |
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| Gibson, Greg, Debat, Vincent, Bloyer, Sébastien, Faradji, Floria, Gidaszewski, Nelly, Navarro, Nicolas, Orozco-terWengel, Pablo, Ribeiro, Valérie, Schlötterer, Christian, Deutsch, Jean S. and Peronnet, Frédérique 2011. Developmental stability: a major role for cyclin G in Drosophila melanogaster. PLoS Genetics 7 (10) , e1002314. 10.1371/journal.pgen.1002314 |
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| Hooftman, Danny A. P., Flavell, Andrew J., Jansen, Hans, den Nijs, Hans C. M., Syed, Naeem H., Sørensen, Anker, Orozco-terWengel, Pablo and van de Wiel, Clemens C. M. 2011. Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development. Evolutionary Applications 4 (5) , pp. 648-659. 10.1111/j.1752-4571.2011.00188.x |
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| Orozco-terWengel, Pablo, Corander, J. and Schlotterer, C. 2011. Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure. Molecular Ecology 20 (6) , pp. 1108-1121. 10.1111/j.1365-294X.2010.04990.x |
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| Kayser, Manfred, Kofler, Robert, Orozco-terWengel, Pablo, De Maio, Nicola, Pandey, Ram Vinay, Nolte, Viola, Futschik, Andreas, Kosiol, Carolin and Schlötterer, Christian 2011. PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals. PLoS ONE 6 (1) , e15925. 10.1371/journal.pone.0015925 |
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| Charruau, P., Fernandes, C., Orozco-terWengel, Pablo, Peters, J., Hunter, L., Ziaie, H., Jourabchian, A., Jowkar, H., Schaller, G., Ostrowski, S., Vercammen, P., Grange, T., Schlotteler, C., Kotze, A., Geigl, E. -M., Walzer, C. and Burger, P. A. 2011. Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates. Molecular Ecology 20 (4) , pp. 706-724. 10.1111/j.1365-294X.2010.04986.x |
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| Silbermayr, K., Orozco-terWengel, Pablo, Charruau, P., Enkhbileg, D., Walzer, C., Vogl, C., Schwarzenberger, F., Kaczensky, P. and Burger, P. A. 2010. High mitochondrial differentiation levels between wild and domestic Bactrian camels: a basis for rapid detection of maternal hybridization. Animal Genetics 41 (3) , pp. 315-318. 10.1111/j.1365-2052.2009.01993.x |
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| Nunes, Maria D. S., Orozco-terWengel, Pablo, Kreissl, Michaela and Schlotterer, Christian 2010. Multiple hybridization events between Drosophila simulans and Drosophila mauritiana are supported by mtDNA introgression. Molecular Ecology 19 (21) , pp. 4695-4707. 10.1111/j.1365-294X.2010.04838.x |
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| Orozco-terWengel, Pablo, Nagy, Z., Vieites, D., Vences, M. and Louis Jr, E. 2008. Phylogeography and phylogenetic relationships of Malagasy tree and ground boas. Biological Journal of the Linnean Society 95 (3) , pp. 640-652. 10.1111/j.1095-8312.2008.01083.x |
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| Chiari, Ylenia, Orozco-Terwengel, Pablo, Vences, Miguel, Vieites, David R., Sarovy, Augustin, Randrianirina, Jasmin E., Meyer, Axel and Louis Jr, Edward 2006. Genetic identification of units for conservation in tomato frogs, genus Dyscophus. Conservation Genetics 7 (4) , pp. 473-482. 10.1007/s10592-005-9057-x |
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