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Number of items: 35.

Rustad, Even H., Nadeu, Ferran, Angelopoulos, Nicos, Ziccheddu, Bachisio, Bolli, Niccolò, Puente, Xose S., Campo, Elias, Landgren, Ola and Maura, Francesco 2021. mmsig: a fitting approach to accurately identify somatic mutational signatures in hematological malignancies. Communications Biology 4 (1) , 424. 10.1038/s42003-021-01938-0
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Rustad, Even H., Yellapantula, Venkata D., Glodzik, Dominik, Maclachlan, Kylee H., Diamond, Benjamin, Boyle, Eileen M., Ashby, Cody, Blaney, Patrick, Gundem, Gunes, Hultcrantz, Malin, Leongamornlert, Daniel, Angelopoulos, Nicos, Agnelli, Luca, Auclair, Daniel, Zhang, Yanming, Dogan, Ahmet, Bolli, Niccolo, Papaemmanuil, Elli, Anderson, Kenneth C., Moreau, Philippe, Avet-Loiseau, Herve, Munshi, Nikhil C., Keats, Jonathan J., Campbell, Peter J., Morgan, Gareth J., Landgren, Ola and Maura, Francesco 2020. Revealing the impact of structural variants in multiple myeloma. Blood Cancer Discovery 1 (3) , pp. 258-273. 10.1158/2643-3230.BCD-20-0132

Rustad, Even H., Yellapantula, Venkata, Leongamornlert, Daniel, Bolli, Niccolo, Ledergor, Guy, Nadeu, Ferran, Angelopoulos, Nicos, Dawson, Kevin J., Mitchell, Thomas J., Osborne, Robert J., Ziccheddu, Bachisio, Carniti, Cristiana, Montefusco, Vittorio, Corradini, Paolo, Anderson, Kenneth C., Moreau, Philippe, Papaemmanuil, Elli, Alexandrov, Ludmil B., Puente, Xose S., Campo, Elias, Siebert, Reiner, Avet-Loiseau, Herve, Landgren, Ola, Munshi, Nikhil, Campbell, Peter J. and Maura, Francesco 2020. Timing the initiation of multiple myeloma. Nature Communications 11 (1) , 1917. 10.1038/s41467-020-15740-9
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Jones, Sylwia, King, Peter J., Antonescu, Costin N., Sugiyama, Michael G., Bhamra, Amandeep, Surinova, Silvia, Angelopoulos, Nicos, Kragh, Michael, Pedersen, Mikkel W., Hartley, John A., Futter, Clare E. and Hochhauser, Daniel 2020. Targeting of EGFR by a combination of antibodies mediates unconventional EGFR trafficking and degradation. Scientific Reports 10 (1) , 663. 10.1038/s41598-019-57153-9
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Draaisma, Kaspar, Chatzipli, Aikaterini, Taphoorn, Martin, Kerkhof, Melissa, Weyerbrock, Astrid, Sanson, Marc, Hoeben, Ann, Lukacova, Slavka, Lombardi, Giuseppe, Leenstra, Sieger, Hanse, Monique, Fleischeuer, Ruth, Watts, Colin, McAbee, Joseph, Angelopoulos, Nicos, Gorlia, Thierry, Golfinopoulos, Vassilis, Kros, Johan M., Verhaak, Roel G. W., Bours, Vincent, van den Bent, Martin J., McDermott, Ultan, Robe, Pierre A. and French, Pim J. 2020. Molecular evolution of IDH wild-type glioblastomas treated with standard of care affects survival and design of precision medicine trials: a report from the EORTC 1542 study. Journal of Clinical Oncology 38 (1) , pp. 81-99. 10.1200/JCO.19.00367

Maura, Francesco, Rustad, Even H., Bolli, Niccolo, Yellapantula, Venkata, Leongamornlert, Daniel A., Nadeu, Ferran, Angelopoulos, Nicos, Dawson, Kevin J., Mitchell, Thomas J., Osborne, Rob, Ziccheddu, Bachisio, Carniti, Cristiana, Montefusco, Vittorio, Corradini, Paolo, Anderson, Kenneth C., Moreau, Philippe, Papaemmanuil, Elli, Alexandrov, Ludmil, Puente, Xose S., Campo, Elias, Siebert, Reiner, Avet-Loiseau, Herve, Munshi, Nikhil C., Campbell, Peter J. and Landgren, Ola 2019. Timing the initiation of multiple myeloma. Presented at: 61st American Society of Hematology Annual Meeting, Orlando, FL, USA, 7-10 December 2019. , vol. Supple. American Society of Hematology, 10.1182/blood-2019-124357

Maura, Francesco, Rustad, Even, Yellapantula, Venkata, Bolli, Niccolo, Leongamornlert, Daniel, Nadeu, Ferran, Angelopoulos, Nicos, Dawson, Kevin, Mitchell, Thomas, Osborne, Rob, Ziccheddu, Bachisio Ziccheddu, Carniti, Cristiana, Montefusco, Vittorio, Corradini, Paolo, Anderson, Kenneth C., Moreau, Philippe, Papaemmanuil, Elli, Alexandrov, Ludmil, Puente, Xose, Campo, Elias, Siebert, Reiner, Avet-Loiseau, Herve, Munshi, Nikhil, Campbell, Peter and Landgren, C. Ola 2019. Timing the initiation of multiple myeloma. Presented at: 17th International Myeloma Workshop, Boston, MA, USA, 12-15 September 2019. , vol. 10, Su. Elsevier, E6-E7. 10.1016/j.clml.2019.09.008

Angelopoulos, Nicos and Wielemaker, Jan 2019. Advances in big data bio analytics. Presented at: 35th International Conference on Logic Programming (CLP 2019), Las Cruces, NM, USA, 20-25 September 2019. Proceedings 35th International Conference on Logic Programming (Technical Communications). ETCS, 309–322.
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Maura, Francesco, Bolli, Niccolo, Angelopoulos, Nicos, Dawson, Kevin J., Leongamornlert, Daniel, Martincorena, Inigo, Mitchell, Thomas J., Fullam, Anthony, Gonzalez, Santiago, Szalat, Raphael, Abascal, Federico, Rodriguez-Martin, Bernardo, Samur, Mehmet Kemal, Glodzik, Dominik, Roncador, Marco, Fulciniti, Mariateresa, Tai, Yu Tzu, Minvielle, Stephane, Magrangeas, Florence, Moreau, Philippe, Corradini, Paolo, Anderson, Kenneth C., Tubio, Jose M. C., Wedge, David C., Gerstung, Moritz, Avet-Loiseau, Herve, Munshi, Nikhil and Campbell, Peter J. 2019. Genomic landscape and chronological reconstruction of driver events in multiple myeloma. Nature Communications 10 , 3835. 10.1038/s41467-019-11680-1
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Maura, Francesco, Leongamornlert, Daniel, Angelopoulos, Nicos, Dawson, Kevin J., Samur, Mehmet Kemal, Szalat, Raphael, Tai, Yu-Tzu, Minvielle, Stephane, Magrangeas, Florence, Moreau, Philippe, Corradini, Paolo, Anderson, Kenneth C., Avet-Loiseau, Herve, Campbell, Peter J., Munshi, Nikhil and Bolli, Niccolo 2018. The landscape of structural variant sgnatures in multiple myeloma identifies distinct disease subgroups with implications for pathogenesis. Presented at: 60th American Society of Hematology Annual Meeting, San Diego, CA, USA, 1-4 December 2018. , vol. Supple. American Society of Hematology, 10.1182/blood-2018-99-112420

Maura, F., Dawson, K. J., Angelopoulos, N., Minvielle, S., Martincorena, I., Mitchell, T. J., Fullam, A., Gonzalez, S., Glodzik, D., Szalat, R., Samur, M. K., Fulciniti, M., Tai, Y. T., Magrangeas, F., Moreau, P., Anderson, K., Wedge, D. C., Gerstung, M., Corradini, P., Avet-Loiseau, H., Munshi, N., Campbell, P. J. and Bolli, N. 2018. The genomic landscape of structural variations and complex events in multiple myeloma. Presented at: XV Congress of the Italian Society of Experimental Hematology, Rimini, Italy, 18-20 October 2018. , vol. S3. S14.

Bolli, N., Maura, F., Dawson, K. J., Angelopoulos, N., Minvielle, S., Martincorena, I., Mitchell, T. J., Gonzalez, A. F. S., Glodzik, D., Szalat, R., Samur, M. K., Fulciniti, M., Tai, Y. T., Magrangeas, F., Moreau, P., Anderson, K., Wedge, D. C., Gerstung, M., Corradini, P., Avet-Loiseau, H., Munshi, N. and Campbell, P. J. 2018. Analysis of mutations and structural variants to redefine the genomic landscape of multiple myeloma and its clinical implications. Presented at: XV Congress of the Italian Society of Experimental Hematology, Rimini, Italy, 18-20 October 2018. , vol. S3. Ferrata Storti Foundation, S51.

Grinfeld, Jacob, Nangalia, Jyoti, Baxter, E. Joanna, Wedge, David C., Angelopoulos, Nicos, Cantrill, Robert, Godfrey, Anna L., Papaemmanuil, Elli, Gundem, Gunes, MacLean, Cathy, Cook, Julia, O'Neil, Laura, O'Meara, Sarah, Teague, Jon W., Butler, Adam P., Massie, Charlie E., Williams, Nicholas, Nice, Francesca L., Andersen, Christen L., Hasselbalch, Hans C., Guglielmelli, Paola, McMullin, Mary F., Vannucchi, Alessandro M., Harrison, Claire N., Gerstung, Moritz, Green, Anthony R. and Campbell, Peter J. 2018. Classification and personalized prognosis in myeloproliferative neoplasms. New England Journal of Medicine 379 (15) , pp. 1416-1430. 10.1056/NEJMoa1716614
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Mitchell, Thomas J., Turajlic, Samra, Rowan, Andrew, Nicol, David, Farmery, James H. R., O'Brien, Tim, Martincorena, Inigo, Tarpey, Patrick, Angelopoulos, Nicos, Yates, Lucy R., Butler, Adam P., Raine, Keiran, Stewart, Grant D., Challacombe, Ben, Fernando, Archana, Lopez, Jose I., Hazell, Steve, Chandra, Ashish, Chowdhury, Simon, Rudman, Sarah, Soultati, Aspasia, Stamp, Gordon, Fotiadis, Nicos, Pickering, Lisa, Au, Lewis, Spain, Lavinia, Lynch, Joanna, Stares, Mark, Teague, Jon, Maura, Francesco, Wedge, David C., Horswell, Stuart, Chambers, Tim, Litchfield, Kevin, Xu, Hang, Stewart, Aengus, Elaidi, Reza, Oudard, Stephane, McGranahan, Nicholas, Csabai, Istvan, Gore, Martin, Futreal, P. Andrew, Larkin, James, Lynch, Andy G., Szallasi, Zoltan, Swanton, Charles and Campbell, Peter J. 2018. Timing the landmark events in the evolution of clear cell renal cell cancer: TRACERx Renal. Cell 173 (3) , 611-623.e17. 10.1016/j.cell.2018.02.020
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Maura, F., Petljak, M., Lionetti, M., Cifola, I., Liang, W., Pinatel, E., Alexandrov, L. B., Fullam, A., Martincorena, I., Dawson, K. J., Angelopoulos, N., Samur, M. K., Szalat, R., Zamora, J., Tarpey, P., Davies, H., Corradini, P., Anderson, K. C., Minvielle, S., Neri, A., Avet-Loiseau, H., Keats, J., Campbell, P. J., Munshi, N. C. and Bolli, N. 2018. Biological and prognostic impact of APOBEC-induced mutations in the spectrum of plasma cell dyscrasias and multiple myeloma cell lines. Leukemia 32 (4) , pp. 1043-1047. 10.1038/leu.2017.345
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Maura, Francesco, Bolli, Niccolo, Dawson, Kevin J., Angelopoulos, Nicos, Minvielle, Stephane, Martincorena, Inigo, Mitchell, Thomas J., Fullam, Anthony, Gonzalez, Santiago, Glodzik, Dominik, Szalat, Raphael, Samur, Mehmet Kemal, Fulciniti, Mariateresa, Tai, Yu-Tzu, Magrangeas, Florence, Moreau, Philippe, Corradini, Paolo, Anderson, Kenneth C., Wedge, David, Gerstung, Moritz, Avet-Loiseau, Herve, Munshi, Nikhil and Campbell, Peter J. 2017. The genomic landscape of multiple myeloma complex structural variations. Presented at: 59th American Society of Hematology Annual Meeting, Atlanta, GA, USA, 9-12 December 2-17. , vol. Supple. American Society of Hematology, 10.1182/blood.V130.Suppl_1.330.330

Maura, Francesco, Petljak, Mia, Lionetti, Marta, Cifola, Ingrid, Liang, Winnie, Pinatel, Eva, Alexadrov, Ludmil, Fullam, Anthony, Martincorena, Inigo, Dawson, Kevin J., Angelopoulos, Nicos, Szalat, Raphael, Corradini, Paolo, Anderson, Kenneth C., Minvielle, Stephane, Samur, Mehmet K., Neri, Antonino, Avet-Loiseau, Herve, Keats, Jonathan, Campbell, Peter J., Munshi, Nikhil and Bolli, Niccolo 2017. Biological and prognostic impact of apobec-induced mutations in the spectrum of plasma cell dyscrasias. Blood 130 (Supple) , 1771. 10.1182/blood.V130.Suppl_1.1771.1771
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Angelopoulos, Nicos and Wielemaker, Jan 2017. Accessing biological data as Prolog facts. Presented at: 19th International Symposium on Principles and Practice of Declarative Programming, Namur, Belgium, 9-12 October 2017. PPDP '17: Proceedings of the 19th International Symposium on Principles and Practice of Declarative Programming. ACM, pp. 29-38. 10.1145/3131851.3131857

Grinfeld, Jacob, Nangalia, Jyoti, Baxter, E. Joanna, Godfrey, Anna L., Guglielmelli, Paola, Cantrill, Rob, Wedge, David, Angelopoulos, Nicos, Gundem, Gunes, Massie, Charlie, Papaemmanuil, Elli, MacLean, Cathy, Cook, Julia, Nice, Francesca Lauren, Andersen, Christen Lykkegaard, Hasselbalch, Hans Carl, McMullin, Mary Frances, Vannucchi, Alessandro M., Harrison, Claire N., Gerstung, Moritz, Campbell, Peter J. and Green, Anthony R. 2017. Personalized prognostic predictions for patients with myeloproliferative neoplasms through integration of comprehensive genomic and clinical information. Blood 130 (Supple) , p. 491. 10.1182/blood.V130.Suppl_1.491.491

Angelopoulos, Nicos and Cussens, James 2017. Distributional logic programming for Bayesian knowledge representation. International Journal of Approximate Reasoning 80 , pp. 52-66. 10.1016/j.ijar.2016.08.004

Maura, F., Petljak, M., Minvielle, S., Szalat, R., Lionetti, M., Cifola, I., Liang, W., Pinatel, E., Alexadrov, L., Fullam, A., Martincorena, I., Dawson, K. J., Angelopoulos, N., Samur, M. K., Zamora, J., Tai, Y. Tzu, Magrangeas, F., Tarpey, P., Davies, H., Moreau, P., Corradini, P., Anderson, K., Neri, A., Lohr, J. G., Avet-Loiseau, H., Keats, J. J., Stratton, M. R., Campbell, P., Munshi, N. and Bolli, N. 2017. The apobec mutational activity in multiple myeloma: from diagnosis to cell lines. Presented at: 46th Congress of the Italian Society of Hematology, Rome, Italy, 15-18 October 2017. , vol. S3. Ferrata Storti Foundation, p. 124.

Angelopoulos, Nicos, Abdallah, Samer and Giamas, Georgios 2016. Advances in integrative statistics for logic programming. International Journal of Approximate Reasoning 78 , pp. 103-115. 10.1016/j.ijar.2016.06.008

Favicchio, Rosy, Angelopoulos, Nicos, Brickute, Diana, Fortt, Robin, Twyman, Frazer, Giamas, Georgios, Lacal, Juan Carlos and Aboagye, Eric O. 2016. Choline metabolism is an early predictor of EGFR-mediated survival in NSCLC. Presented at: 107th Annual Meeting of the American Association for Cancer Research, New Orleans, LA, USA, 16-20 April 2016. Proceedings of the 107th Annual Meeting of the American Association for Cancer Research. , vol. 14. Philadelphia, PA, USA: American Association for Cancer Research, p. 4235. 10.1158/1538-7445.AM2016-4235

Angelopoulos, Nicos, Stebbing, Justin, Xu, Yichen, Giamas, Georgios and Zhang, Hua 2016. Proteome-wide dataset supporting functional study of tyrosine kinases in breast cancer. Data in Brief 7 , pp. 740-746. 10.1016/j.dib.2016.03.024
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Nunes, Joao, Zhang, Hua, Angelopoulos, Nicos, Chhetri, Jyoti, Osipo, Clodia, Grothey, Arnhild, Stebbing, Justin and Giamas, Georgios 2016. ATG9A loss confers resistance to trastuzumab via c-Cbl mediated Her2 degradation. Oncotarget 7 (19) , pp. 27599-27612. 10.18632/oncotarget.8504
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Stebbing, Justin, Zhang, Hua, Xu, Yichen, Grothey, Arnhild, Ajuh, Paul, Angelopoulos, Nicos and Giamas, Georgios 2015. Characterization of the Tyrosine Kinase-Regulated Proteome in Breast Cancer by Combined use of RNA interference (RNAi) and Stable Isotope Labeling with Amino Acids in Cell Culture (SILAC) Quantitative Proteomics. Molecular and Cellular Proteomics 151 , 555–568. 10.1074/mcp.M115.048090
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Xu, Yichen, Zhang, Hua, Nguyen, Van Thuy Mai, Angelopoulos, Nicos, Nunes, Joao, Reid, Alistair, Buluwela, Laki, Magnani, Luca, Stebbing, Justin and Giamas, Georgios 2015. LMTK3 represses tumor suppressor-like genes through chromatin remodeling in breast cancer. Cell Reports 12 (5) , pp. 837-849. 10.1016/j.celrep.2015.06.073
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Zhang, Hua, Angelopoulos, Nicos, Xu, Yichen, Grothey, Arnhild, Nunes, Joao, Stebbing, Justin and Giamas, Georgios 2015. Proteomic profile of KSR1-regulated signalling in response to genotoxic agents in breast cancer. Breast Cancer Research and Treatment 151 (3) , pp. 555-568. 10.1007/s10549-015-3443-y
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Angelopoulos, Nicos and Giamas, Georgios 2015. A logical approach to working with biological databases. Presented at: 31st International Conference on Logic Programming (ICLP 2015), Cork, Ireland, 31 August - 4 September 2015. Proceedings of the Technical Communications of the 31st International Conference on Logic Programming (ICLP 2015). CEUR,
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MacIntyre, David A., Chandiramani, Manju, Lee, Yun S., Kindinger, Lindsay, Smith, Ann, Angelopoulos, Nicos, Lehne, Benjamin, Arulkumaran, Shankari, Brown, Richard, Teoh, Tiong Ghee, Holmes, Elaine, Nicoholson, Jeremy K., Marchesi, Julian Roberto and Bennett, Phillip R. 2015. The vaginal microbiome during pregnancy and the postpartum period in a European population. Scientific Reports 5 , 8988. 10.1038/srep08988
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Spanjaard, Emma, Smal, Ihor, Angelopoulos, Nicos, Verlaan, Ingrid, Matov, Alexandre, Meijering, Erik, Wessels, Lodewyk, Bos, Hans and de Rooij, Johan 2015. Quantitative imaging of focal adhesion dynamics and their regulation by HGF and Rap1 signaling. Experimental Cell Research 330 (2) , pp. 382-397. 10.1016/j.yexcr.2014.10.012

Husi, Holger, McAllister, Fiona, Angelopoulos, Nicos, Butler, Victoria J., Bailey, Kevin R., Malone, Kirk, MacKay, Logan, Taylor, Paul, Page, Antony P., Turner, Nicholas J., Barran, Perdita E. and Walkinshaw, Malcolm 2010. Selective chemical intervention in the proteome of Caenorhabditis elegans. Journal of Proteome Research 9 (11) , 6060–6070. 10.1021/pr100427c

Angelopoulos, Nicos, Hadjiprocopis, Andreas and Walkinshaw, Malcolm D. 2009. Bayesian model averaging for ligand discovery. Journal of Chemical Information and Modeling 49 (6) , pp. 1547-1557. 10.1021/ci900046u

Angelopoulos, Nicos and Cussens, James 2009. Bayesian learning of Bayesian networks with informative priors. Annals of Mathematics and Artificial Intelligence 54 , pp. 53-98. 10.1007/s10472-009-9133-x

Angelopoulos, Nicos and Cussens, James 2001. Markov chain Monte Carlo using tree-based priors on model structure. Presented at: 17th The Conference on Uncertainty in Artificial Intelligence (UAI 2001), Seattle, WA, USA, 2-5 August 2001. Published in: Breese, Jack and Koller, Daphne eds. UAI'01: Proceedings of the Seventeenth conference on Uncertainty in artificial intelligence. San Francisco, USA: Morgan Kaufmann Publishers Inc., 10.5555/2074022.2074025

This list was generated on Wed May 5 04:15:56 2021 BST.